ProtSpace: a tool for visualizing protein space - bioRxiv

protogel link space   protogel toto Protein language models pLMs generate high-dimensional representations of proteins, so called embeddings, that capture complex information stored in the set of evolved sequences. Interpreting these embeddings remains an important challenge. ProtSpace provides one solution through an open-source Python package that visualizes protein embeddings interactively in 2D and 3D. The combination of

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